Difference between revisions of "GTRD"
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Ivan Yevshin (Talk | contribs) |
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GTRD (Gene Transcription Regulation Database) is a database of transcription factor binding sites identified from ChIP-seq experiments. | GTRD (Gene Transcription Regulation Database) is a database of transcription factor binding sites identified from ChIP-seq experiments. | ||
| − | + | GTRD identifies binding sites from ChIP-seq experiments available from literature, GEO, SRA and ENCODE databases. | |
The web interface to GTRD is freely available at http://192.168.199.241/bioumlweb/#anonymous=true&perspective=GTRD. | The web interface to GTRD is freely available at http://192.168.199.241/bioumlweb/#anonymous=true&perspective=GTRD. | ||
| + | |||
| + | ==Database statistics== | ||
| + | GTRD uses 2417 ChIP-seq experiments for 470 distinct sequence specific transcription factors. | ||
| + | [[File:gtrd_exp_by_specie.png|thumb|ChIP-seq experiments by species]] | ||
Revision as of 17:31, 1 July 2013
GTRD (Gene Transcription Regulation Database) is a database of transcription factor binding sites identified from ChIP-seq experiments. GTRD identifies binding sites from ChIP-seq experiments available from literature, GEO, SRA and ENCODE databases. The web interface to GTRD is freely available at http://192.168.199.241/bioumlweb/#anonymous=true&perspective=GTRD.
Database statistics
GTRD uses 2417 ChIP-seq experiments for 470 distinct sequence specific transcription factors.
