Difference between revisions of "Mixture of normal components (analysis)"
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* '''Input track''' – Select input ChIP-seq track (must be the result of <nowiki>'</nowiki>Merge binding regions for cell-lines<nowiki>'</nowiki> analysis) | * '''Input track''' – Select input ChIP-seq track (must be the result of <nowiki>'</nowiki>Merge binding regions for cell-lines<nowiki>'</nowiki> analysis) | ||
* '''Matrix''' – Path to positional weight matrix | * '''Matrix''' – Path to positional weight matrix | ||
| − | * '''TF class''' – TF class in Wingender classification (like <nowiki>'</nowiki>1.1 | + | * '''TF class''' – TF class in Wingender classification (like <nowiki>'</nowiki>2.1.1.1.4<nowiki>'</nowiki>) |
* '''Number of mixture components''' – Number of mixture components | * '''Number of mixture components''' – Number of mixture components | ||
* '''P-value''' – P-value | * '''P-value''' – P-value | ||
Revision as of 15:31, 10 June 2013
- Analysis title
- File:Binding-regions-Mixture-of-normal-components-icon.png Mixture of normal components
- Provider
- Institute of Systems Biology
- Class
NormalComponentsMixture- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
Mixture of normal components for maximal IPS scores predicted in binding regions (singleTrack) of given tfClass (charts table is created)
Parameters:
- Input track – Select input ChIP-seq track (must be the result of 'Merge binding regions for cell-lines' analysis)
- Matrix – Path to positional weight matrix
- TF class – TF class in Wingender classification (like '2.1.1.1.4')
- Number of mixture components – Number of mixture components
- P-value – P-value
- Output table – Table with charts will be created in this location
