Difference between revisions of "Reads to matrices (workflow)"
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:BED file containing control reads | :BED file containing control reads | ||
;Sequences source | ;Sequences source | ||
| + | :Select Ensembl version which corresponds to your input data | ||
;Output folder | ;Output folder | ||
:Folder to store output | :Folder to store output | ||
Latest revision as of 17:23, 16 May 2013
- Workflow title
- Reads to matrices
- Provider
- Autosome.Ru
[edit] Workflow overview
[edit] Description
This workflow allows you to upload BED file which contains aligned reads, run the MACS peak finder, remove too short peaks and run ChIPMunk analysis to predict the motifs.
[edit] Parameters
- Experiment track (BED)
- BED file containing experimental data
- Control track (BED)
- BED file containing control reads
- Sequences source
- Select Ensembl version which corresponds to your input data
- Output folder
- Folder to store output
