MicroRNA aligner (analysis)
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Revision as of 18:38, 16 July 2013 by BioUML wiki Bot (Talk | contribs)
- Analysis title
MicroRNA aligner
- Provider
- Institute of Systems Biology
- Class
MicroRNAAligner- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
Aligns NGS reads to microRNA
Parameters:
- Input type – Type of input files
- csfasta – csfasta
- qualities – qualities
- fastq – fastq
- miRNASequences – miRNASequences
- adapter – adapter
- matchScore – matchScore
- mismatchPenalty – mismatchPenalty
- gapPenalty – gapPenalty
- alignmentScoreThreshold – alignmentScoreThreshold
- threadCount – threadCount
- unmapped – unmapped
- alignment – alignment
