Difference between revisions of "Filter track by condition (analysis)"
From BioUML platform
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(Automatic synchronization with BioUML) |
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
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[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] |
Latest revision as of 18:15, 9 December 2020
- Analysis title
- Filter track by condition
- Provider
- Institute of Systems Biology
- Class
FilterTrackByCondition
- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
[edit] Description
This analysis leaves only those sites which satisfy a given JavaScript condition. Each site from the track is tested against the condition.
- Input track – track you want to filter
- Condition – JavaScript expression which must return true if condition passed or false otherwise. The following variables are available:
- seq – sequence or chromosome name,
- from – site start position,
- to – site end position,
- length – site length,
- strand – site strand (0 = unknown, 1 = n/a, 2 = +, 3 = −, 4 = both),
- type – site type,
- properties – additional track-specific properties
- Output track – specify the path where to store the result