Difference between revisions of "BAM filter strand specific (analysis)"
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Revision as of 19:01, 13 February 2017
- Analysis title
- BAM filter strand specific
- Provider
- Institute of Systems Biology
- Class
FilterStrandSpecific
- Plugin
- biouml.plugins.riboseq (RiboSeq Experiment)
Description
Filter strand specific reads in BAM file
Parameters:
- Input BAM track – BAM track to filter
- Transcript set – Transcript set
- Annotation source – Source of gene annotation
- Transcripts annotation track – Track with transcripts annotation in BED format
- Genome sequence – Collection of chromosomal sequences
- Ensembl – Ensembl database version
- Transcript subset – Subset of transcripts used in this analysis
- GTF file – GTF file
- Enabled (expert) – Enabled
- Output BAM track – Output BAM track