Cluster track (analysis)

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Analysis title
Default-analysis-icon.png Cluster track
Provider
Institute of Systems Biology
Class
ClusterTrack
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

Cluster sites in track

Parameters:

  • Input track – Input track
  • Genome – Reference genome
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • Max distance – Maximum allowed distance between adjacent sites in cluster
  • Cluster size – Minimal size of cluster
  • Cluster track – Resulting track with cluster sites
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