Add genes from CMA (analysis)

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Analysis title
Default-analysis-icon.png Add genes from CMA
Provider
Biosoft
Class
AddGenesAnalysis
Plugin
biouml.plugins.genomeenhancer (Genome Enhancer)

Description

Add genes from CMA result

Parameters:

  • Input Diagram – Input Diagram.
  • CMA result – CMA result.
  • Column with genes – Column with genes ids.
  • Profile – Profile.
  • Full model track – Full model track
  • Sequences – Result of Annotate Track with Genes analysis (if not set automatically)
  • Add Only producing genes – Add only genes producing proteins which are already in the diagram.
  • Add Only regulated genes – Add only genes which are regulated by ptoteins from diagram.
  • Genes limit – Genes limit.
  • Layout gene clusters – It is recommended to switch layout off if number of genes is large.
  • Layout model – It is recommended to switch layout off if number of proteins is large.
  • Output Diagram – Output Diagram.
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