Difference between revisions of "Transcript set to track (analysis)"

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(Automatic synchronization with BioUML)
 
(Automatic synchronization with BioUML)
 
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;Analysis title
 
;Analysis title
:[[File:Default-analysis-icon.png]] Transcript set to track
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:[[File:Match-sites-and-genes-Transcript-set-to-track-icon.png]] Transcript set to track
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
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==== Description ====
 
==== Description ====
Convert transcript set to track
+
Convert transcript set to track.
  
 
==== Parameters: ====
 
==== Parameters: ====
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[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
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[[Category:Match sites and genes (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Match-sites-and-genes-Transcript-set-to-track-icon.png Transcript set to track
Provider
Institute of Systems Biology
Class
TranscriptSetToTrack
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

[edit] Description

Convert transcript set to track.

[edit] Parameters:

  • Table – Table of source genes
  • Species – Taxonomical species
  • From – From position (relative to gene start)
  • To – To position (relative to gene start)
  • Close TSS handling (expert) – How to handle TSS located close to each other
  • Leading column (expert) – Numeric column used to select one TSS from adjacent
  • Minimal distance – Minimal distance between adjacent TSS
  • Output name – Output name
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