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  1. (hist) ‎Modeling cardiovascular system ‎[3 bytes]
  2. (hist) ‎Covid-19 Differential Delay Model ‎[3 bytes]
  3. (hist) ‎Non-Linear Mixed Effects Model ‎[8 bytes]
  4. (hist) ‎Galaxy admin ‎[27 bytes]
  5. (hist) ‎Contributors ‎[34 bytes]
  6. (hist) ‎NGS misc ‎[104 bytes]
  7. (hist) ‎Softberry (perspective) ‎[111 bytes]
  8. (hist) ‎GTRD (perspective) ‎[135 bytes]
  9. (hist) ‎ChIPMunk (perspective) ‎[153 bytes]
  10. (hist) ‎Ru.biosoft.jobcontrol (plugin) ‎[162 bytes]
  11. (hist) ‎Ru.biosoft.exception (plugin) ‎[166 bytes]
  12. (hist) ‎Default (perspective) ‎[168 bytes]
  13. (hist) ‎Databases installation ‎[171 bytes]
  14. (hist) ‎Muscle metabolism ‎[174 bytes]
  15. (hist) ‎Ru.biosoft.works (plugin) ‎[175 bytes]
  16. (hist) ‎Com.developmentontheedge.beans (plugin) ‎[178 bytes]
  17. (hist) ‎Biouml.plugins.glycan (plugin) ‎[181 bytes]
  18. (hist) ‎Ru.biosoft.services (plugin) ‎[183 bytes]
  19. (hist) ‎Biouml.plugins.sabiork (plugin) ‎[184 bytes]
  20. (hist) ‎Biouml.plugins.gne (plugin) ‎[187 bytes]
  21. (hist) ‎Ru.biosoft.treetable (plugin) ‎[187 bytes]
  22. (hist) ‎BioUML installation ‎[188 bytes]
  23. (hist) ‎Biouml.plugins.psimi (plugin) ‎[188 bytes]
  24. (hist) ‎Ru.biosoft.access.search (plugin) ‎[188 bytes]
  25. (hist) ‎Biouml.plugins.test (plugin) ‎[189 bytes]
  26. (hist) ‎Biouml.plugins.matlab (plugin) ‎[190 bytes]
  27. (hist) ‎Biouml.plugins.uniprot (plugin) ‎[191 bytes]
  28. (hist) ‎Biouml.plugins.dropbox (plugin) ‎[193 bytes]
  29. (hist) ‎Biouml.plugins.obo (plugin) ‎[194 bytes]
  30. (hist) ‎Biouml.plugins.genenet (plugin) ‎[195 bytes]
  31. (hist) ‎Biouml.plugins.wiki (plugin) ‎[196 bytes]
  32. (hist) ‎Ru.biosoft.graph (plugin) ‎[196 bytes]
  33. (hist) ‎Ru.biosoft.math (plugin) ‎[196 bytes]
  34. (hist) ‎Biouml.plugins.geneways (plugin) ‎[197 bytes]
  35. (hist) ‎Ru.biosoft.graphics (plugin) ‎[197 bytes]
  36. (hist) ‎Biouml.plugins.proteinmodel (plugin) ‎[198 bytes]
  37. (hist) ‎Ru.biosoft.server.tomcat (plugin) ‎[198 bytes]
  38. (hist) ‎Biouml.workbench.graph (plugin) ‎[199 bytes]
  39. (hist) ‎Biouml.plugins.gxl (plugin) ‎[200 bytes]
  40. (hist) ‎Biouml.plugins.svg (plugin) ‎[200 bytes]
  41. (hist) ‎Ru.biosoft.vm (plugin) ‎[201 bytes]
  42. (hist) ‎Biouml.plugins.graphml (plugin) ‎[202 bytes]
  43. (hist) ‎Biouml.plugins.googledrive (plugin) ‎[202 bytes]
  44. (hist) ‎Biouml.plugins.users (plugin) ‎[204 bytes]
  45. (hist) ‎Biouml.plugins.simulation-test (plugin) ‎[207 bytes]
  46. (hist) ‎Biouml.plugins.stochastic (plugin) ‎[208 bytes]
  47. (hist) ‎Com.developmentontheedge.server (plugin) ‎[208 bytes]
  48. (hist) ‎Com.developmentontheedge.util (plugin) ‎[208 bytes]
  49. (hist) ‎Biouml.plugins.miriam (plugin) ‎[209 bytes]
  50. (hist) ‎Biouml.plugins.agentmodeling (plugin) ‎[210 bytes]
  51. (hist) ‎Biouml.plugins.reactome.biohub (plugin) ‎[211 bytes]
  52. (hist) ‎Ru.biosoft.bsa.server (plugin) ‎[211 bytes]
  53. (hist) ‎Using R in BioUML ‎[219 bytes]
  54. (hist) ‎SNP (reference type) ‎[253 bytes]
  55. (hist) ‎Matrices (reference type) ‎[260 bytes]
  56. (hist) ‎Isoforms - GTRD ‎[270 bytes]
  57. (hist) ‎ChIP-seq peaks - GTRD ‎[272 bytes]
  58. (hist) ‎DAE Models examples ‎[274 bytes]
  59. (hist) ‎Galaxy (host object) ‎[276 bytes]
  60. (hist) ‎Structures - PDB ‎[276 bytes]
  61. (hist) ‎Site models - GTRD ‎[277 bytes]
  62. (hist) ‎Html (element type) ‎[281 bytes]
  63. (hist) ‎Biouml.plugins.softberry (plugin) ‎[282 bytes]
  64. (hist) ‎Proteins - PDB ‎[282 bytes]
  65. (hist) ‎Pathways (reference type) ‎[282 bytes]
  66. (hist) ‎Genes (reference type) ‎[283 bytes]
  67. (hist) ‎ChIP experiment - GTRD ‎[283 bytes]
  68. (hist) ‎Enzymes - ExPASy ‎[283 bytes]
  69. (hist) ‎Using Galaxy in BioUML ‎[284 bytes]
  70. (hist) ‎MiRNA - miRBase ‎[284 bytes]
  71. (hist) ‎Probes (reference type) ‎[286 bytes]
  72. (hist) ‎Categories (reference type) ‎[286 bytes]
  73. (hist) ‎Biouml.plugins.pathfinder (plugin) ‎[287 bytes]
  74. (hist) ‎Substances (reference type) ‎[288 bytes]
  75. (hist) ‎Cell - EndoNet ‎[292 bytes]
  76. (hist) ‎Proteins (reference type) ‎[292 bytes]
  77. (hist) ‎Enzymes - KEGG ‎[292 bytes]
  78. (hist) ‎Hormone - EndoNet ‎[301 bytes]
  79. (hist) ‎Transcripts (reference type) ‎[301 bytes]
  80. (hist) ‎Landing ‎[301 bytes]
  81. (hist) ‎Biouml.plugins.pass (plugin) ‎[305 bytes]
  82. (hist) ‎Drugs - DrugBank ‎[305 bytes]
  83. (hist) ‎Mature-miRNA - miRBase ‎[305 bytes]
  84. (hist) ‎Categories - BKL ‎[308 bytes]
  85. (hist) ‎Stem-loop-miRNA - miRBase ‎[312 bytes]
  86. (hist) ‎VAT output (file format) ‎[313 bytes]
  87. (hist) ‎Biouml.plugins.bowtie (plugin) ‎[314 bytes]
  88. (hist) ‎Ru.biosoft.fs (plugin) ‎[314 bytes]
  89. (hist) ‎Biouml.plugins.node (plugin) ‎[317 bytes]
  90. (hist) ‎Biouml.plugins.antimony (plugin) ‎[323 bytes]
  91. (hist) ‎Biouml.plugins.microarray (plugin) ‎[325 bytes]
  92. (hist) ‎Biouml.plugins.creasemarks (plugin) ‎[327 bytes]
  93. (hist) ‎Ru.biosoft.plugins.jri (plugin) ‎[327 bytes]
  94. (hist) ‎Biouml.plugins.sbw (plugin) ‎[328 bytes]
  95. (hist) ‎DDMoRe consortium ‎[329 bytes]
  96. (hist) ‎Biouml.plugins.cellml (plugin) ‎[334 bytes]
  97. (hist) ‎Biouml.plugins.ginsim (plugin) ‎[334 bytes]
  98. (hist) ‎Ru.biosoft.plugins.graph (plugin) ‎[336 bytes]
  99. (hist) ‎Docker meta ‎[339 bytes]
  100. (hist) ‎Biouml.plugins.sbgn (plugin) ‎[340 bytes]
  101. (hist) ‎Biouml.plugins.biopax (plugin) ‎[345 bytes]
  102. (hist) ‎Biouml.plugins.seek (plugin) ‎[345 bytes]
  103. (hist) ‎Table (host object) ‎[347 bytes]
  104. (hist) ‎Biouml.plugins.cytoscape (plugin) ‎[348 bytes]
  105. (hist) ‎Biouml.plugins.hemodynamics (plugin) ‎[351 bytes]
  106. (hist) ‎Biouml.plugins.go (plugin) ‎[352 bytes]
  107. (hist) ‎BioUML Development Kit ‎[353 bytes]
  108. (hist) ‎Varscan output (file format) ‎[354 bytes]
  109. (hist) ‎Biouml.plugins.server (plugin) ‎[357 bytes]
  110. (hist) ‎Galaxy ‎[358 bytes]
  111. (hist) ‎Biouml.plugins.lucene (plugin) ‎[362 bytes]
  112. (hist) ‎HTML file ‎[364 bytes]
  113. (hist) ‎Biouml.plugins.mirprom (plugin) ‎[364 bytes]
  114. (hist) ‎BioUML overview ‎[364 bytes]
  115. (hist) ‎Biouml.plugins.bionetgen (plugin) ‎[366 bytes]
  116. (hist) ‎Biouml.plugins.agilent (plugin) ‎[367 bytes]
  117. (hist) ‎Server administrator ‎[368 bytes]
  118. (hist) ‎KEGG (reference type) ‎[368 bytes]
  119. (hist) ‎Matrices - GTRD ‎[369 bytes]
  120. (hist) ‎Find master regulators in mutated network (workflow) ‎[370 bytes]
  121. (hist) ‎Biouml.plugins.riboseqArticleResult (plugin) ‎[371 bytes]
  122. (hist) ‎Ru.biosoft.server (plugin) ‎[372 bytes]
  123. (hist) ‎Proteins - GTRD ‎[372 bytes]
  124. (hist) ‎Unspecified (reference type) ‎[373 bytes]
  125. (hist) ‎Filter SPAdes output ‎[376 bytes]
  126. (hist) ‎BioUML Simulation result (file format) ‎[378 bytes]
  127. (hist) ‎SBGN examples ‎[382 bytes]
  128. (hist) ‎Developed models ‎[383 bytes]
  129. (hist) ‎Agilent microarray file ‎[385 bytes]
  130. (hist) ‎Genes - BKL ‎[388 bytes]
  131. (hist) ‎Ru.biosoft.templates (plugin) ‎[389 bytes]
  132. (hist) ‎Illumina microarray file ‎[390 bytes]
  133. (hist) ‎Genes - Illumina ‎[393 bytes]
  134. (hist) ‎Report (host object) ‎[394 bytes]
  135. (hist) ‎Biouml.plugins.expression (plugin) ‎[396 bytes]
  136. (hist) ‎BioUML web client ‎[396 bytes]
  137. (hist) ‎Find master regulators in mutated network (TRANSPATH(R)) (workflow) ‎[397 bytes]
  138. (hist) ‎Proteins - Transfac ‎[398 bytes]
  139. (hist) ‎Ensembl (host object) ‎[398 bytes]
  140. (hist) ‎Categories - ExPASy ‎[398 bytes]
  141. (hist) ‎Quantification of RNA-seq in BAM format for mouse mm9 single end (workflow) ‎[402 bytes]
  142. (hist) ‎Image file ‎[404 bytes]
  143. (hist) ‎Matrices - TRANSFAC ‎[405 bytes]
  144. (hist) ‎Softberry, Inc. ‎[405 bytes]
  145. (hist) ‎Proteins - EndoNet ‎[406 bytes]
  146. (hist) ‎Proteins - BKL ‎[406 bytes]
  147. (hist) ‎Mapping to ontologies and comparison for two gene sets (TRANSPATH(R)) (workflow) ‎[407 bytes]
  148. (hist) ‎Mapping to ontologies and comparison for two gene sets (HumanPSD(TM)) (workflow) ‎[407 bytes]
  149. (hist) ‎Quantification of RNA-seq in FASTQ format for mouse mm9 single end (workflow) ‎[410 bytes]
  150. (hist) ‎Text output file generated by R (file format) ‎[411 bytes]
  151. (hist) ‎R installation ‎[415 bytes]
  152. (hist) ‎Das (host object) ‎[416 bytes]
  153. (hist) ‎Probes - Agilent Tox Array ‎[420 bytes]
  154. (hist) ‎Pathways - Reactome ‎[421 bytes]
  155. (hist) ‎ModelReduction (host object) ‎[421 bytes]
  156. (hist) ‎Biouml.plugins.research (plugin) ‎[422 bytes]
  157. (hist) ‎Ru.biosoft.server.servlets (plugin) ‎[423 bytes]
  158. (hist) ‎Ru.biosoft.proteome (plugin) ‎[424 bytes]
  159. (hist) ‎Genes - Transpath ‎[425 bytes]
  160. (hist) ‎Biouml.plugins.kegg (plugin) ‎[428 bytes]
  161. (hist) ‎Transcripts - Illumina ‎[429 bytes]
  162. (hist) ‎SBML(CellDesigner) (file format) ‎[431 bytes]
  163. (hist) ‎Methylation probes - Illumina ‎[433 bytes]
  164. (hist) ‎Create per TF flat files (analysis) ‎[434 bytes]
  165. (hist) ‎Autosome.Ru ‎[435 bytes]
  166. (hist) ‎Update pubmed (analysis) ‎[435 bytes]
  167. (hist) ‎Pathways - Transpath ‎[438 bytes]
  168. (hist) ‎Find enriched TF binding sites in variation sites (TRANSFAC(R)) (workflow) ‎[439 bytes]
  169. (hist) ‎Genes - Unigene ‎[441 bytes]
  170. (hist) ‎Text file ‎[443 bytes]
  171. (hist) ‎Proteins - Transpath ‎[443 bytes]
  172. (hist) ‎Antimony (file format) ‎[446 bytes]
  173. (hist) ‎Install ExPASy (analysis) ‎[449 bytes]
  174. (hist) ‎Affymetrix CEL file ‎[451 bytes]
  175. (hist) ‎Fastq format ‎[453 bytes]
  176. (hist) ‎Biouml.plugins.chemoinformatics (plugin) ‎[454 bytes]
  177. (hist) ‎Force directed layout ‎[454 bytes]
  178. (hist) ‎Probes - Agilent ‎[455 bytes]
  179. (hist) ‎Genes - Gene symbol ‎[455 bytes]
  180. (hist) ‎Prepare target genes by expression (analysis) ‎[456 bytes]
  181. (hist) ‎Text (element type) ‎[458 bytes]
  182. (hist) ‎Probes - Illumina ‎[459 bytes]
  183. (hist) ‎Ftp (host object) ‎[462 bytes]
  184. (hist) ‎Substances - Pharmaceutical compounds ‎[464 bytes]
  185. (hist) ‎Pindel output (file format) ‎[467 bytes]
  186. (hist) ‎Galaxy method (element type) ‎[467 bytes]
  187. (hist) ‎Fastq compressed (file format) ‎[467 bytes]
  188. (hist) ‎SPAdes stats ‎[471 bytes]
  189. (hist) ‎Substances - DrugBank (geneXplain) ‎[474 bytes]
  190. (hist) ‎Proteins - Transpath peptides ‎[478 bytes]
  191. (hist) ‎Proteins - Transpath isogroups ‎[480 bytes]
  192. (hist) ‎Find common effectors for multiple gene sets (TRANSPATH(R)) (workflow) ‎[481 bytes]
  193. (hist) ‎Biouml.plugins.perfectosape (plugin) ‎[484 bytes]
  194. (hist) ‎Biouml.plugins.download (plugin) ‎[487 bytes]
  195. (hist) ‎Encode quality metrics estimation (analysis) ‎[487 bytes]
  196. (hist) ‎BioPAX file ‎[488 bytes]
  197. (hist) ‎Ru.biosoft.galaxy (plugin) ‎[493 bytes]
  198. (hist) ‎Biouml.plugins.machinelearning (plugin) ‎[493 bytes]
  199. (hist) ‎Export per cell clusters (analysis) ‎[496 bytes]
  200. (hist) ‎Biouml.plugins.metabolics (plugin) ‎[497 bytes]
  201. (hist) ‎Mapping to ontologies (HumanPSD(TM)) (workflow) ‎[497 bytes]
  202. (hist) ‎Proteins - Transpath complexes ‎[498 bytes]
  203. (hist) ‎Dormand-Prince ‎[500 bytes]
  204. (hist) ‎Remote application client (analysis) ‎[500 bytes]
  205. (hist) ‎Validate Experiments (analysis) ‎[503 bytes]
  206. (hist) ‎Proteins - Transpath modified forms ‎[506 bytes]
  207. (hist) ‎BPMN ‎[507 bytes]
  208. (hist) ‎Download model (analysis) ‎[508 bytes]
  209. (hist) ‎Biouml.plugins.das (plugin) ‎[510 bytes]
  210. (hist) ‎3D viewer ‎[511 bytes]
  211. (hist) ‎SEDX archive (file format) ‎[512 bytes]
  212. (hist) ‎Cytoscape network format ‎[512 bytes]
  213. (hist) ‎Identify enriched composite modules in promoters (TRANSFAC(R)) (workflow) ‎[513 bytes]
  214. (hist) ‎Covid 19 parameters ‎[517 bytes]
  215. (hist) ‎Generic file ‎[520 bytes]
  216. (hist) ‎R (host object) ‎[521 bytes]
  217. (hist) ‎Proteins - NCBI ‎[521 bytes]
  218. (hist) ‎Perfectosape (host object) ‎[521 bytes]
  219. (hist) ‎Infer network (analysis) ‎[521 bytes]
  220. (hist) ‎Biouml.plugins.genemodels (plugin) ‎[524 bytes]
  221. (hist) ‎Sbw (host object) ‎[529 bytes]
  222. (hist) ‎Categories - GTRD ‎[530 bytes]
  223. (hist) ‎Research diagram ‎[530 bytes]
  224. (hist) ‎Biouml.plugins.simulation (plugin) ‎[531 bytes]
  225. (hist) ‎Network (host object) ‎[531 bytes]
  226. (hist) ‎Change diagram (analysis) ‎[534 bytes]
  227. (hist) ‎Matrix library (element type) ‎[536 bytes]
  228. (hist) ‎IPython format ‎[536 bytes]
  229. (hist) ‎Categories - Gene ontology ‎[539 bytes]
  230. (hist) ‎Probes - Affymetrix miRNA-4-0 ‎[539 bytes]
  231. (hist) ‎Create folder (analysis) ‎[540 bytes]
  232. (hist) ‎TrackInfo table creation (analysis) ‎[540 bytes]
  233. (hist) ‎TRANSFAC matrices format ‎[541 bytes]
  234. (hist) ‎Identify enriched motifs in promoters (TRANSFAC(R)) (workflow) ‎[541 bytes]
  235. (hist) ‎Install TRANSFAC(R) database (analysis) ‎[543 bytes]
  236. (hist) ‎Site counts in repeats (analysis) ‎[543 bytes]
  237. (hist) ‎Copy data element (analysis) ‎[543 bytes]
  238. (hist) ‎Generate Table From JSON (analysis) ‎[544 bytes]
  239. (hist) ‎Biouml.plugins.pharm (plugin) ‎[546 bytes]
  240. (hist) ‎Create state (analysis) ‎[546 bytes]
  241. (hist) ‎Open per TF view (analysis) ‎[546 bytes]
  242. (hist) ‎Biouml.plugins.mirbase (plugin) ‎[549 bytes]
  243. (hist) ‎Prepare finished tables (analysis) ‎[549 bytes]
  244. (hist) ‎Focused upstream analysis (TRANSFAC(R) and TRANSPATH(R)) (workflow) ‎[550 bytes]
  245. (hist) ‎Probes - Affymetrix HuGene-2-0-st ‎[551 bytes]
  246. (hist) ‎Probes - Affymetrix HuGene-2-1-st ‎[551 bytes]
  247. (hist) ‎Probes - Affymetrix RaGene-2-0-st ‎[551 bytes]
  248. (hist) ‎Institute of Systems Biology ‎[552 bytes]
  249. (hist) ‎Enriched upstream analysis (TRANSFAC(R) and TRANSPATH(R)) (workflow) ‎[552 bytes]
  250. (hist) ‎ChromatinInfo table creation (analysis) ‎[552 bytes]

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