Difference between revisions of "Site distribution (analysis)"

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(Plugin name added)
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;Analysis title
 
;Analysis title
:[[File:BSA-Site-distribution-icon.png]] Site distribution
+
:[[File:Default-analysis-icon.png]] Site distribution
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
 +
;Class
 +
:{{Class|biouml.plugins.ensembl.analysis.SiteDistribution}}
 
;Plugin
 
;Plugin
:biouml.plugins.ensembl (Support for Ensembl using EnsJ)
+
:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]]
  
 
==== Description ====
 
==== Description ====
Compute distribution of sites around gene boundaries
+
Compute distribution of sites around gene boundaries.
  
 
==== Parameters: ====
 
==== Parameters: ====
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[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
+
[[Category:Match sites and genes (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Default-analysis-icon.png Site distribution
Provider
Institute of Systems Biology
Class
SiteDistribution
Plugin
biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)

[edit] Description

Compute distribution of sites around gene boundaries.

[edit] Parameters:

  • Input track – Input track
  • Specie – Specie
  • Window width – The width of window around anchor point (transcription start site, transcription end site)
  • Output folder – Output folder
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