Difference between revisions of "SAM or BAM alignment file"

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(Automatic synchronization with BioUML)

Revision as of 15:24, 4 April 2013

SAM or BAM alignment file (*.sam, *.bam)

Import SAM/BAM file

Parameters:

  • File to import – Specify file from your computer
  • Target – Path in repository to put imported file to
  • Properties – Additional importer parameters
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Sequence collection
    • Genome ID string – Something like 'hg18' or 'mm6'
    • Create index – Create index (can take a long time)
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