Difference between revisions of "Prepare Search by regulation (analysis)"

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** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
 
** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
 
* '''geneMaxDistance''' – geneMaxDistance
 
* '''geneMaxDistance''' – geneMaxDistance
* '''outputTrack''' – outputTrack
 
 
* '''outputTable''' – outputTable
 
* '''outputTable''' – outputTable
  

Revision as of 19:00, 13 February 2017

Analysis title
Default-analysis-icon.png Prepare Search by regulation
Provider
Institute of Systems Biology
Class
PrepareSearchByRegulation
Plugin
biouml.plugins.gtrd (GTRD)

Description

Prepare tables for Search by regulation analysis

Parameters:

  • allPeaksPath – allPeaksPath
  • Properties for track import – Properties for track import
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • geneMaxDistance – geneMaxDistance
  • outputTable – outputTable
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