Difference between revisions of "Mutation effect (analysis)"

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;Analysis title
 
;Analysis title
:[[File:BSA-Mutation-effect-icon.png]] Mutation effect
+
:[[File:Mutations-Mutation-effect-icon.png]] Mutation effect
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
 +
;Class
 +
:{{Class|biouml.plugins.ensembl.analysis.mutationeffect.Analysis}}
 
;Plugin
 
;Plugin
 
:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]]
 
:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]]
  
 
==== Description ====
 
==== Description ====
Determine effect of mutation on protein
+
Determine effect of mutation on protein.
  
 
==== Parameters: ====
 
==== Parameters: ====
  
 
* '''Input track''' – Track of mutations to process
 
* '''Input track''' – Track of mutations to process
 +
* '''Properties for track import''' – Properties for track import
 +
** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually
 +
** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
 
* '''Output track''' – Output track
 
* '''Output track''' – Output track
  
 
[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
+
[[Category:Mutations (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Mutations-Mutation-effect-icon.png Mutation effect
Provider
Institute of Systems Biology
Class
Analysis
Plugin
biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)

[edit] Description

Determine effect of mutation on protein.

[edit] Parameters:

  • Input track – Track of mutations to process
  • Properties for track import – Properties for track import
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • Output track – Output track
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