Difference between revisions of "Gene features (analysis)"

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m (Protected "Gene features (analysis)": Autogenerated page (‎[edit=sysop] (indefinite)))
(Automatic synchronization with BioUML)
 
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Extract gene features from GTRD
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;Analysis title
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:[[File:Default-analysis-icon.png]] Gene features
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;Provider
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:[[Institute of Systems Biology]]
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;Class
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:{{Class|biouml.plugins.gtrd.analysis.GeneFeatures}}
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;Plugin
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:[[Biouml.plugins.gtrd (plugin)|biouml.plugins.gtrd (GTRD)]]
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==== Description ====
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Extract gene features from GTRD.
  
 
==== Parameters: ====
 
==== Parameters: ====
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* '''cellLine''' – cellLine
 
* '''cellLine''' – cellLine
 
* '''maxTSSDistance''' – maxTSSDistance
 
* '''maxTSSDistance''' – maxTSSDistance
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* '''scoreProperty''' – scoreProperty
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* '''useSummit''' – useSummit
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* '''intervals''' – intervals
 
* '''experimentsPath''' – experimentsPath
 
* '''experimentsPath''' – experimentsPath
 
* '''otherSites''' – otherSites
 
* '''otherSites''' – otherSites
 
* '''outputPath''' – outputPath
 
* '''outputPath''' – outputPath
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* '''geneCentricOutputPath''' – geneCentricOutputPath
  
 
[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:GTRD (analyses group)]]
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[[Category:GTRD build (analyses group)]]
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[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:14, 9 December 2020

Analysis title
Default-analysis-icon.png Gene features
Provider
Institute of Systems Biology
Class
GeneFeatures
Plugin
biouml.plugins.gtrd (GTRD)

[edit] Description

Extract gene features from GTRD.

[edit] Parameters:

  • specie – specie
  • cellLine – cellLine
  • maxTSSDistance – maxTSSDistance
  • scoreProperty – scoreProperty
  • useSummit – useSummit
  • intervals – intervals
  • experimentsPath – experimentsPath
  • otherSites – otherSites
  • outputPath – outputPath
  • geneCentricOutputPath – geneCentricOutputPath
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