Difference between revisions of "Gathering genome statistics (analysis)"

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Revision as of 17:16, 6 June 2013

Analysis title
File:Binding-regions-Gathering-genome-statistics-icon.png Gathering genome statistics
Provider
Institute of Systems Biology
Class
GatheringGenomeStatistics
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

Preliminary identification of the auxiliary information about genome (creation of tracks: '_chromosomeGaps', '_chromosomeLengths', '_genes', 'summaryOfGenes')

Parameters:

  • Sequences collection – Select a source of nucleotide sequences
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • Path to output folder – Output folder will be created under this location
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