Difference between revisions of "Gathering genome statistics (analysis)"

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(Default analysis icon as separate file)
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:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
 
;Class
 
;Class
:{{Class|ru.biosoft.bsa.analysis.bindingRegions.GatheringGenomeStatistics}}
+
:{{Class|biouml.plugins.bindingregions.analysis.GatheringGenomeStatistics}}
 
;Plugin
 
;Plugin
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
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:[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]]
  
 
==== Description ====
 
==== Description ====

Revision as of 13:38, 17 June 2013

Analysis title
Default-analysis-icon.png Gathering genome statistics
Provider
Institute of Systems Biology
Class
GatheringGenomeStatistics
Plugin
biouml.plugins.bindingregions (Binding-regions related analyses)

Description

Preliminary identification of the auxiliary information about genome (creation of tracks: '_chromosomeGaps', '_chromosomeLengths', '_genes', 'summaryOfGenes')

Parameters:

  • Sequences collection – Select a source of nucleotide sequences
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • Path to output folder – Output folder will be created under this location
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