Difference between revisions of "Chromosome enrichment (analysis)"

Latest revision as of 18:15, 9 December 2020

Find chromosomes enriched with given genes.

Input genes – Input genes
Genome – Genome
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
- Genome ID string – Something like 'hg18' or 'mm6'
Output table – Output table
Output image – Output image

@@ Line 1: / Line 1: @@
-Find chromosomes enriched with given genes
+;Analysis title
+:[[File:Default-analysis-icon.png]] Chromosome enrichment
+;Provider
+:[[Institute of Systems Biology]]
+;Class
+:{{Class|ru.biosoft.bsa.analysis.ChromosomeEnrichment}}
+;Plugin
+:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
+==== Description ====
+Find chromosomes enriched with given genes.
 ==== Parameters: ====
@@ Line 6: / Line 16: @@
 * '''Genome''' – Genome
 ** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually
-** '''Sequence collection''' – Sequence collection
+** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
 ** '''Genome ID string''' – Something like <nowiki>'</nowiki>hg18<nowiki>'</nowiki> or <nowiki>'</nowiki>mm6<nowiki>'</nowiki>
 * '''Output table''' – Output table
@@ Line 12: / Line 22: @@
 [[Category:Analyses]]
-[[Category:BSA (analyses group)]]
+[[Category:Unclassified (analyses group)]]
+[[Category:ISB analyses]]
+[[Category:Autogenerated pages]]