Difference between revisions of "ChIP-Seq - Identify composite modules on peaks (TRANSFAC(R)) (workflow)"
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== Workflow overview == | == Workflow overview == | ||
[[File:ChIP-Seq-Identify-composite-modules-on-peaks-TRANSFAC-R-workflow-overview.png|400px]] | [[File:ChIP-Seq-Identify-composite-modules-on-peaks-TRANSFAC-R-workflow-overview.png|400px]] | ||
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Latest revision as of 16:19, 11 December 2014
- Workflow title
- ChIP-Seq - Identify composite modules on peaks (TRANSFAC(R))
- Provider
- geneXplain GmbH
[edit] Workflow overview
[edit] Description
This workflow is designed to search for composite regulatory modules on DNA sequences identified by ChiP-Seq approach. On the first step potential binding sites are identified using TRANSFAC(R) database. On the second step composite modules are found using genetic algorithm.
[edit] Parameters
- Input Yes track
- Sequence source
- Species
- Input No track
- Minimal number of pairs
- Maximal number of pairs
- Number of iterations
- Results folder
