Difference between revisions of "Annotate track with genes (analysis)"

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;Analysis title
 
;Analysis title
:[[File:BSA-Annotate-track-with-genes-icon.png]]Annotate track with genes
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:[[File:Match-sites-and-genes-Annotate-track-with-genes-icon.png]] Annotate track with genes
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
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;Class
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:{{Class|biouml.plugins.ensembl.analysis.AnnotateTrackWithGenes}}
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;Plugin
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:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]]
  
 
==== Description ====
 
==== Description ====
Add properties to each track site describing genes where this site falls
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Add properties to each track site describing genes where this site falls.
  
 
==== Parameters: ====
 
==== Parameters: ====
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[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
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[[Category:Match sites and genes (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Match-sites-and-genes-Annotate-track-with-genes-icon.png Annotate track with genes
Provider
Institute of Systems Biology
Class
AnnotateTrackWithGenes
Plugin
biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)

[edit] Description

Add properties to each track site describing genes where this site falls.

[edit] Parameters:

  • Input track – Track to annotate
  • Species – Taxonomical species
  • 5' region size – Include 5' region (promoter) of given size in bp
  • 3' region size – Include 3' region of given size in bp
  • Output track – Where to store an output
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