Difference between revisions of "Analysis of Cis-Regulatory Modules (analysis)"

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;Analysis title
 
;Analysis title
:[[File:BSA-Analysis-of-Cis-Regulatory-Modules-icon.png]] Analysis of Cis-Regulatory Modules
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:[[File:Analysis-of-Cis-Regulatory-Modules-analysis-icon.png]] Analysis of Cis-Regulatory Modules
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]

Revision as of 12:32, 16 May 2013

Analysis title
File:Analysis-of-Cis-Regulatory-Modules-analysis-icon.png Analysis of Cis-Regulatory Modules
Provider
Institute of Systems Biology
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Parameters:

  • MODE – MODE defines the concrete session of given analysis. The detailed description of MODE see in panel 'Application Log'
  • Exp parameters – Exp parameters
    • Sequence path – Sequence path
  • ChIP-Seq Regions path – ChIP-Seq Regions path
  • Sequences path – It is nessecary for determination of Genome Build
  • Minimal number of overlaps – Minimally admissible number of overlapped ChIP-Seq regions
  • Specie – Specie
  • Table path – Path where to save resulting table (includes proper table name
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