Identification of cis-regulatory modules with given pattern of TF-classes (analysis)
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Revision as of 16:17, 11 December 2014 by BioUML wiki Bot (Talk | contribs)
- Analysis title
- Identification of cis-regulatory modules with given pattern of TF-classes
- Provider
- Institute of Systems Biology
- Class
CisModuleWithGivenPatternIdentification
- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
Identification of cis-regulatory modules with given pattern of TF-classes
Parameters:
- Input track – Select input track (it has to contain the merged binding regions; it can be the result of 'Merge binding regions for cell-lines' analysis)
- Maximal number of missing TF-classes – Maximal number of TF-classes that can be absent in cis-regulatory modules
- Pattern of cis-regulatory module – Select TF-classes
- Path to table with genes – Path to table with genes
- Path to output folder – Output folder will be created under this location