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  1. BioUML installation‏‎ (12:38, 28 March 2013)
  2. BioUML Development Kit‏‎ (16:19, 16 April 2013)
  3. Using Galaxy in BioUML‏‎ (12:42, 19 April 2013)
  4. Short term model of the heart output regulation‏‎ (12:17, 7 May 2013)
  5. BioStore‏‎ (12:33, 7 May 2013)
  6. Generic file‏‎ (14:13, 7 May 2013)
  7. GeneXplain GmbH‏‎ (16:44, 7 May 2013)
  8. Institute of Systems Biology‏‎ (16:44, 7 May 2013)
  9. Look and feel (extension point)‏‎ (16:06, 8 May 2013)
  10. Solver (extension point)‏‎ (16:21, 8 May 2013)
  11. Image (element type)‏‎ (11:29, 13 May 2013)
  12. Export (extension point)‏‎ (15:51, 13 May 2013)
  13. Service (extension point)‏‎ (15:57, 13 May 2013)
  14. Moved class (extension point)‏‎ (16:12, 13 May 2013)
  15. Beans (extension point)‏‎ (16:14, 13 May 2013)
  16. Visible plugin (extension point)‏‎ (16:54, 13 May 2013)
  17. Template (extension point)‏‎ (17:35, 13 May 2013)
  18. Context item (extension point)‏‎ (17:41, 13 May 2013)
  19. Text (element type)‏‎ (10:26, 14 May 2013)
  20. Virtual collection (extension point)‏‎ (10:38, 14 May 2013)
  21. Type driver (extension point)‏‎ (10:44, 14 May 2013)
  22. Preprocessor (extension point)‏‎ (10:49, 14 May 2013)
  23. Annotation (extension point)‏‎ (10:57, 14 May 2013)
  24. Proteins - Transpath peptides‏‎ (18:14, 14 May 2013)
  25. Genes - Transpath‏‎ (18:14, 14 May 2013)
  26. Proteins - Transpath modified forms‏‎ (18:14, 14 May 2013)
  27. Proteins - Transpath‏‎ (18:14, 14 May 2013)
  28. Proteins - EndoNet‏‎ (18:14, 14 May 2013)
  29. Proteins - Transpath complexes‏‎ (18:14, 14 May 2013)
  30. Genes - Illumina‏‎ (18:14, 14 May 2013)
  31. Probes (reference type)‏‎ (18:14, 14 May 2013)
  32. Transcripts - Illumina‏‎ (18:14, 14 May 2013)
  33. Matrices - TRANSFAC‏‎ (18:14, 14 May 2013)
  34. Genes (reference type)‏‎ (18:14, 14 May 2013)
  35. Proteins - BKL‏‎ (18:14, 14 May 2013)
  36. SNP (reference type)‏‎ (18:14, 14 May 2013)
  37. Proteins - Transfac‏‎ (18:14, 14 May 2013)
  38. Proteins - GTRD‏‎ (18:14, 14 May 2013)
  39. Matrices (reference type)‏‎ (18:14, 14 May 2013)
  40. Transcripts (reference type)‏‎ (18:14, 14 May 2013)
  41. Proteins (reference type)‏‎ (18:14, 14 May 2013)
  42. Genes - BKL‏‎ (18:14, 14 May 2013)
  43. Matrices - GTRD‏‎ (10:14, 15 May 2013)
  44. Reference type (extension point)‏‎ (10:36, 15 May 2013)
  45. Probes - Agilent‏‎ (14:32, 15 May 2013)
  46. Probes - Affymetrix‏‎ (14:32, 15 May 2013)
  47. Genes - GenBank‏‎ (14:33, 15 May 2013)
  48. Proteins - IPI‏‎ (14:33, 15 May 2013)
  49. Proteins - RefSeq‏‎ (14:33, 15 May 2013)
  50. Probes - Illumina‏‎ (14:33, 15 May 2013)
  51. Genes - Unigene‏‎ (14:33, 15 May 2013)
  52. Genes - Gene symbol‏‎ (14:33, 15 May 2013)
  53. Genes - Entrez‏‎ (14:33, 15 May 2013)
  54. Transcripts - RefSeq‏‎ (14:33, 15 May 2013)
  55. Html (element type)‏‎ (11:04, 16 May 2013)
  56. Find common effectors in networks (TRANSPATH(R)) (workflow)‏‎ (13:28, 16 May 2013)
  57. Find master regulators for multiple gene sets (TRANSPATH(R)) (workflow)‏‎ (13:28, 16 May 2013)
  58. Find master regulators in networks (TRANSPATH(R)) (workflow)‏‎ (13:28, 16 May 2013)
  59. R (host object)‏‎ (14:57, 16 May 2013)
  60. Chipmunk (host object)‏‎ (14:57, 16 May 2013)
  61. Das (host object)‏‎ (14:57, 16 May 2013)
  62. Cdk (host object)‏‎ (14:57, 16 May 2013)
  63. Galaxy (host object)‏‎ (14:57, 16 May 2013)
  64. Ensembl (host object)‏‎ (14:57, 16 May 2013)
  65. Microarray (host object)‏‎ (14:57, 16 May 2013)
  66. ModelReduction (host object)‏‎ (14:57, 16 May 2013)
  67. Network (host object)‏‎ (14:57, 16 May 2013)
  68. Optimization (host object)‏‎ (14:57, 16 May 2013)
  69. Sbml (host object)‏‎ (14:57, 16 May 2013)
  70. Sbw (host object)‏‎ (14:57, 16 May 2013)
  71. SimulationEngine (host object)‏‎ (14:57, 16 May 2013)
  72. Table (host object)‏‎ (14:57, 16 May 2013)
  73. Host object (extension point)‏‎ (15:12, 16 May 2013)
  74. Default (perspective)‏‎ (15:46, 16 May 2013)
  75. ChIPMunk (perspective)‏‎ (15:47, 16 May 2013)
  76. GTRD (perspective)‏‎ (15:47, 16 May 2013)
  77. Softberry (perspective)‏‎ (15:47, 16 May 2013)
  78. Softberry, Inc.‏‎ (16:01, 16 May 2013)
  79. Autosome.Ru‏‎ (17:10, 16 May 2013)
  80. Peaks to matrices (workflow)‏‎ (17:23, 16 May 2013)
  81. Reads to matrices (workflow)‏‎ (17:23, 16 May 2013)
  82. Analysis (element type)‏‎ (18:04, 16 May 2013)
  83. Galaxy method (element type)‏‎ (16:30, 17 May 2013)
  84. File (element type)‏‎ (16:31, 17 May 2013)
  85. BED format‏‎ (16:39, 17 May 2013)
  86. CNVnator genotype output (file format)‏‎ (16:39, 17 May 2013)
  87. Breakdancer output (file format)‏‎ (16:39, 17 May 2013)
  88. Gene Transfer Format‏‎ (16:39, 17 May 2013)
  89. General Feature Format‏‎ (16:40, 17 May 2013)
  90. HTML file‏‎ (16:40, 17 May 2013)
  91. Image file‏‎ (16:40, 17 May 2013)
  92. Interval format‏‎ (16:40, 17 May 2013)
  93. Pindel output (file format)‏‎ (16:40, 17 May 2013)
  94. Tabular (file format)‏‎ (16:40, 17 May 2013)
  95. Text file‏‎ (16:40, 17 May 2013)
  96. Text output file generated by R (file format)‏‎ (16:40, 17 May 2013)
  97. VAT output (file format)‏‎ (16:40, 17 May 2013)
  98. VCF format‏‎ (16:40, 17 May 2013)
  99. Varscan output (file format)‏‎ (16:40, 17 May 2013)
  100. ZIP-archive (file format)‏‎ (16:40, 17 May 2013)
  101. Wiggle format‏‎ (16:40, 17 May 2013)
  102. Matrix library (element type)‏‎ (16:52, 17 May 2013)
  103. Matrix (element type)‏‎ (17:04, 17 May 2013)
  104. Site model (element type)‏‎ (17:15, 17 May 2013)
  105. Profile (element type)‏‎ (17:23, 17 May 2013)
  106. Biohub (extension point)‏‎ (11:17, 20 May 2013)
  107. BioHub‏‎ (11:18, 20 May 2013)
  108. Method description HTML file‏‎ (10:51, 28 May 2013)
  109. Upstream analysis (TRANSFAC(R) and GeneWays) (workflow)‏‎ (13:34, 30 May 2013)
  110. Upstream analysis (TRANSFAC(R) and TRANSPATH(R)) (workflow)‏‎ (13:34, 30 May 2013)
  111. Folder (element type)‏‎ (17:40, 30 May 2013)
  112. Join table (analysis)‏‎ (11:14, 31 May 2013)
  113. Extend network (analysis)‏‎ (11:15, 31 May 2013)
  114. Map to Transpath (analysis)‏‎ (11:15, 31 May 2013)
  115. Join diagrams (analysis)‏‎ (11:15, 31 May 2013)
  116. Evolution strategy (SRES) (analysis)‏‎ (11:15, 31 May 2013)
  117. Cellular genetic algorithm (analysis)‏‎ (11:15, 31 May 2013)
  118. GLBSOLVE (analysis)‏‎ (11:15, 31 May 2013)
  119. Quadratic Hill-climbing (analysis)‏‎ (11:15, 31 May 2013)
  120. Particle swarm optimization (analysis)‏‎ (11:15, 31 May 2013)
  121. Correlation Analysis‏‎ (11:15, 31 May 2013)
  122. Hypergeometric analysis‏‎ (11:15, 31 May 2013)
  123. Meta analysis‏‎ (11:15, 31 May 2013)
  124. Up and Down Identification (analysis)‏‎ (11:15, 31 May 2013)
  125. Polynomial Regression analysis‏‎ (11:15, 31 May 2013)
  126. Types (extension point)‏‎ (16:02, 3 June 2013)
  127. Analyses (extension point)‏‎ (16:24, 3 June 2013)
  128. Site models - GTRD‏‎ (14:40, 4 June 2013)
  129. Hormone - EndoNet‏‎ (14:40, 4 June 2013)
  130. Unspecified (reference type)‏‎ (14:40, 4 June 2013)
  131. Cell - EndoNet‏‎ (14:40, 4 June 2013)
  132. ChIP-seq peaks - GTRD‏‎ (14:40, 4 June 2013)
  133. Proteins - PDB‏‎ (14:40, 4 June 2013)
  134. Structures - PDB‏‎ (14:40, 4 June 2013)
  135. Isoforms - GTRD‏‎ (14:40, 4 June 2013)
  136. Disease - MeSH‏‎ (14:40, 4 June 2013)
  137. Perspective‏‎ (15:47, 4 June 2013)
  138. General control panel‏‎ (15:57, 4 June 2013)
  139. Viewpart‏‎ (15:57, 4 June 2013)
  140. SAM or BAM alignment file‏‎ (17:17, 6 June 2013)
  141. SISSRs output (file format)‏‎ (17:17, 6 June 2013)
  142. Reference type‏‎ (17:40, 6 June 2013)
  143. Modular modeling‏‎ (16:16, 7 June 2013)
  144. Databases installation‏‎ (18:05, 11 June 2013)
  145. Layout (extension point)‏‎ (15:37, 14 June 2013)
  146. Research diagram‏‎ (15:42, 14 June 2013)
  147. Force directed layout‏‎ (15:57, 14 June 2013)
  148. Adaptive simulated annealing (analysis)‏‎ (16:16, 14 June 2013)
  149. Install TRANSFAC(R) database (analysis)‏‎ (18:06, 14 June 2013)
  150. Genome coverage (analysis)‏‎ (18:06, 14 June 2013)
  151. Track coverage (analysis)‏‎ (18:07, 14 June 2013)
  152. Create DAS track (analysis)‏‎ (18:07, 14 June 2013)
  153. IPS-scores in SNPs (analysis)‏‎ (13:38, 17 June 2013)
  154. SNP regions in genome (analysis)‏‎ (13:38, 17 June 2013)
  155. About dialog (extension point)‏‎ (15:02, 17 June 2013)
  156. Function (extension point)‏‎ (15:13, 17 June 2013)
  157. Module type (extension point)‏‎ (15:29, 17 June 2013)
  158. Repository pane toolbar‏‎ (15:34, 17 June 2013)
  159. Element action (extension point)‏‎ (15:47, 17 June 2013)
  160. Repository actions provider (extension point)‏‎ (16:18, 17 June 2013)
  161. BioUML user interface‏‎ (13:09, 19 June 2013)
  162. Repository‏‎ (14:40, 19 June 2013)
  163. Information box‏‎ (14:49, 19 June 2013)
  164. Table (element type)‏‎ (14:57, 19 June 2013)
  165. Element type‏‎ (15:12, 19 June 2013)
  166. Graph search‏‎ (15:16, 19 June 2013)
  167. TRRD‏‎ (16:37, 19 June 2013)
  168. Transplorer‏‎ (16:38, 19 June 2013)
  169. GeneNet‏‎ (16:38, 19 June 2013)
  170. Search tools‏‎ (12:02, 24 June 2013)
  171. Features‏‎ (14:53, 25 June 2013)
  172. Reactome‏‎ (15:24, 26 June 2013)
  173. Geneways‏‎ (15:26, 26 June 2013)
  174. Table document‏‎ (16:06, 26 June 2013)
  175. Sequence (element type)‏‎ (12:27, 27 June 2013)
  176. Ensembl‏‎ (13:15, 27 June 2013)
  177. Track (element type)‏‎ (13:29, 27 June 2013)
  178. Biopath‏‎ (15:13, 27 June 2013)
  179. Biomodels‏‎ (15:14, 27 June 2013)
  180. Repository pane‏‎ (15:20, 27 June 2013)
  181. Genome browser‏‎ (11:34, 1 July 2013)
  182. Modular model of the human CVS v.1‏‎ (11:37, 1 July 2013)
  183. Long-term model of the CVS/Renal system‏‎ (11:37, 1 July 2013)
  184. Overall circulation model‏‎ (11:39, 1 July 2013)
  185. Modular model of the human CVS v.2‏‎ (11:40, 1 July 2013)
  186. 1-dimensional arterial tree model‏‎ (11:42, 1 July 2013)
  187. Import (extension point)‏‎ (12:10, 1 July 2013)
  188. Gene Ontology‏‎ (12:27, 1 July 2013)
  189. Databases‏‎ (11:13, 2 July 2013)
  190. Tree-table (element type)‏‎ (13:30, 2 July 2013)
  191. Grid layout‏‎ (13:38, 2 July 2013)
  192. Orthogonal layout‏‎ (13:38, 2 July 2013)
  193. Hierarchical layout‏‎ (13:39, 2 July 2013)
  194. Cross cost grid layout‏‎ (13:39, 2 July 2013)
  195. MGL‏‎ (13:42, 2 July 2013)
  196. Document pane‏‎ (14:22, 2 July 2013)
  197. Proteins - GenBank‏‎ (17:58, 2 July 2013)
  198. ChIP experiment - GTRD‏‎ (17:59, 2 July 2013)
  199. Proteins - NCBI‏‎ (17:59, 2 July 2013)
  200. Categories - Gene ontology‏‎ (18:06, 2 July 2013)
  201. Categories - ExPASy‏‎ (18:06, 2 July 2013)
  202. Pathways (reference type)‏‎ (18:06, 2 July 2013)
  203. Pathways - Transpath‏‎ (18:06, 2 July 2013)
  204. Categories - GTRD‏‎ (18:06, 2 July 2013)
  205. Categories (reference type)‏‎ (18:06, 2 July 2013)
  206. Pathways - Reactome‏‎ (18:06, 2 July 2013)
  207. Matching BioHub‏‎ (15:57, 3 July 2013)
  208. Classification hub‏‎ (16:13, 3 July 2013)
  209. Tree-table document‏‎ (16:46, 3 July 2013)
  210. Enzymes - KEGG‏‎ (18:11, 9 July 2013)
  211. GO installation‏‎ (16:45, 15 July 2013)
  212. Enzymes - ExPASy‏‎ (18:37, 16 July 2013)
  213. Clean up SQL database (analysis)‏‎ (18:38, 16 July 2013)
  214. Galaxy installation‏‎ (11:31, 30 July 2013)
  215. Hash parameters‏‎ (10:42, 2 August 2013)
  216. Server administrator‏‎ (11:00, 19 August 2013)
  217. BioUML server‏‎ (11:02, 19 August 2013)
  218. Product‏‎ (11:04, 19 August 2013)
  219. Document factory (extension point)‏‎ (13:35, 26 August 2013)
  220. Common class (extension point)‏‎ (10:17, 28 August 2013)
  221. Plugin development‏‎ (11:35, 10 September 2013)
  222. BioUML exceptions‏‎ (12:24, 11 September 2013)
  223. Using R in BioUML‏‎ (17:00, 12 September 2013)
  224. Visual modeling‏‎ (17:36, 12 September 2013)
  225. Method (extension point)‏‎ (12:19, 13 September 2013)
  226. BioUML web client‏‎ (14:01, 13 September 2013)
  227. Analysis method development‏‎ (14:06, 13 September 2013)
  228. Script type (extension point)‏‎ (14:32, 13 September 2013)
  229. Query system (extension point)‏‎ (14:38, 13 September 2013)
  230. Data collection listener (extension point)‏‎ (14:42, 13 September 2013)
  231. Diff manager (extension point)‏‎ (14:47, 13 September 2013)
  232. Application log (viewpart)‏‎ (14:51, 13 September 2013)
  233. Script viewpart‏‎ (14:52, 13 September 2013)
  234. Rbiouml‏‎ (12:30, 19 September 2013)
  235. Diagram (element type)‏‎ (14:17, 8 October 2013)
  236. Diagram document‏‎ (16:44, 8 October 2013)
  237. BioUML‏‎ (16:43, 9 October 2013)
  238. to user communication‏‎ (11:57, 10 October 2013)
  239. Diagram editing history‏‎ (15:10, 11 October 2013)
  240. Project‏‎ (15:43, 11 October 2013)
  241. Collaborative diagram editing‏‎ (14:21, 14 October 2013)
  242. Hadoop‏‎ (11:16, 17 November 2013)
  243. NGS misc‏‎ (11:19, 17 November 2013)
  244. KEGG (reference type)‏‎ (14:27, 18 November 2013)
  245. Perfectosape (host object)‏‎ (15:00, 18 November 2013)
  246. Perspective (extension point)‏‎ (15:19, 21 November 2013)
  247. Wizard page (extension point)‏‎ (15:21, 21 November 2013)
  248. Workflow‏‎ (16:54, 3 December 2013)
  249. CloudMan‏‎ (20:52, 5 January 2014)
  250. BioCloudCentral‏‎ (21:13, 5 January 2014)

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