Filter one track by another (analysis)

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Analysis title
Operations-with-genomic-tracks-Filter-one-track-by-another-icon.png Filter one track by another
Provider
Institute of Systems Biology
Class
FilterTrackAnalysis
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

This analysis filters out those sites which are present or absent in another track.

Parameters:

  • Input track – Track which you want to filter
  • Filter track – Track to use as a filter
  • Max distance – Maximal difference between site starts and ends to consider sites equal
  • Fields to compare – Consider sites equal when these fields values match aside from sites position and strand
  • Fields to copy from filter track (expert) – Fields to copy from filter track
  • Ignore empty values (expert) – Ignore empty values during aggregator work
  • Aggregator for numbers (expert) – Function to be used for numerical properties when sites intervals intersects
  • Filtering mode – Specify how to perform the filtering
  • Output track – Specify the location where to store results
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