https://wiki.biouml.org/index.php?action=history&feed=atom&title=Virtual_biology 2026-04-13T13:01:59Z Revision history for this page on the wiki MediaWiki 1.20.3 https://wiki.biouml.org/index.php?title=Virtual_biology&diff=5673&oldid=prev 2014-09-21T16:07:16Z

<p></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 16:07, 21 September 2014</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Virtual biology is umbrella for systems ology sciences<del class="diffchange diffchange-inline">:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">==Introduction==</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">Mathematical models of many biological systems and their parts are being intensively developed now. Titles for many of many of them (or embracing projects) highlight they implication to virtual world: virtual cell[…], virtual liver[…], virtual physiological rat[…], virtual physiological human[…], virtual patient[…], etc. Whether we can try to cover all these projects by one term? Yes, virtual biology is a good candidate for this purpose.</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">A lot of mathematical models of biological systems and their parts were developed using systems approach: [[:Category:systems biology|systems biology]], [[:Category:systems physiology|systems physiology]], </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">[[:Category:systems medicine|systems medicine]] and [[:Category:systems pharmacology|systems pharmacology]]. </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">Titles for many of many of these models (or embracing projects) highlight they implication to virtual world: [[virtual cell]], [[virtual liver]], [[virtual physiological rat]], [[virtual physiological human]], [[virtual patient]], etc.&#160; Whether we can try to cover all these projects by one term? Yes, virtual biology is a good candidate for this purpose.</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">So here we introduce the concept of virtual biology:</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">&lt;br&gt;'''Virtual biology is generalization for systems -ology approaches related with mathematical models in biology and medicine: systems biology, systems physiology, systems medicine and systems pharmacology'''.</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">To define precise meaning of virtual biology we have developed these top level ontology using MediaWiki technology. Wiki technology allows a community to refine and maintain the ontology to represent a consensus view.</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">==</ins>Virtual biology is umbrella for systems ology sciences<ins class="diffchange diffchange-inline">==</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>* [[:Category:systems biology|systems biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>* [[:Category:systems biology|systems biology]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>* [[:Category:systems physiology|systems physiology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>* [[:Category:systems physiology|systems physiology]]</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 17:</td> <td colspan="2" class="diff-lineno">Line 31:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>Some of them explicitly include word 'virtual' in their title:</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>Some of them explicitly include word 'virtual' in their title:</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*virtual cell[ ], &#160;</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*<ins class="diffchange diffchange-inline">[[</ins>virtual cell<ins class="diffchange diffchange-inline">]]</ins>[ ], &#160;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*virtual liver[], &#160;</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*<ins class="diffchange diffchange-inline">[[</ins>virtual liver<ins class="diffchange diffchange-inline">]]</ins>[], &#160;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*virtual physiological rat [1], &#160;</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*<ins class="diffchange diffchange-inline">[[</ins>virtual physiological rat<ins class="diffchange diffchange-inline">]] </ins>[1], &#160;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*virtual physiological human[], &#160;</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*<ins class="diffchange diffchange-inline">[[</ins>virtual physiological human<ins class="diffchange diffchange-inline">]]</ins>[], &#160;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*virtual patient[]. &#160;</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*<ins class="diffchange diffchange-inline">[[</ins>virtual patient<ins class="diffchange diffchange-inline">]]</ins>[]. &#160;</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[:Category:virtual biology projects]] contains more complete list of these projects.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[:Category:virtual biology projects]] contains more complete list of these projects.</div></td></tr> </table>

Fkolpakov@gmail.com https://wiki.biouml.org/index.php?title=Virtual_biology&diff=5611&oldid=prev 2014-02-16T13:48:20Z

<p></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 13:48, 16 February 2014</td> </tr><tr><td colspan="2" class="diff-lineno">Line 12:</td> <td colspan="2" class="diff-lineno">Line 12:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The core of all systems ology sciences are mathematical models that should reproduce dynamics of corresponding biological systems.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The core of all systems ology sciences are mathematical models that should reproduce dynamics of corresponding biological systems.</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">==Projects==</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">There are a number of ongoing large international projects that we can attribute to virtual biology. </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">Some of them explicitly include word 'virtual' in their title:</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*virtual cell[ ], </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*virtual liver[], </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*virtual physiological rat [1], </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*virtual physiological human[], </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*virtual patient[]. </ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[[:Category:virtual biology projects]] contains more complete list of these projects.</ins></div></td></tr> </table>

Fkolpakov@gmail.com https://wiki.biouml.org/index.php?title=Virtual_biology&diff=5609&oldid=prev 2014-02-16T13:40:52Z

<p>Created page with &quot;Virtual biology is umbrella for systems ology sciences: * <a href="/index.php/Category:Systems_biology" title="Category:Systems biology">systems biology</a> * <a href="/index.php/Category:Systems_physiology" title="Category:Systems physiology">systems physiology</a> * [[:Category:sys...&quot;</p> <p><b>New page</b></p><div>Virtual biology is umbrella for systems ology sciences:<br /> * [[:Category:systems biology|systems biology]]<br /> * [[:Category:systems physiology|systems physiology]]<br /> * [[:Category:systems pharmacology|systems pharmacology]]. <br /> <br /> <br /> Roughly they corresponds:<br /> * [[:Category:systems biology|systems biology]] - [[:Category:virtual cell|virtual cell]]<br /> * [[:Category:systems physiology|systems physiology]] - [[:Category:virtual human|virtual human]] and physiological models of other high eukaryote organism, for example [[virtual rat]].<br /> * [[:Category:systems pharmacology|systems pharmacology]] - [[:Category:virtual patient|virtual patient]]. <br /> <br /> <br /> The core of all systems ology sciences are mathematical models that should reproduce dynamics of corresponding biological systems.</div>

Fkolpakov@gmail.com