https://wiki.biouml.org/index.php?action=history&feed=atom&title=Transform_track_to_table_%28analysis%29 2026-04-23T07:44:43Z Revision history for this page on the wiki MediaWiki 1.20.3 https://wiki.biouml.org/index.php?title=Transform_track_to_table_(analysis)&diff=6978&oldid=prev 2017-02-13T12:00:27Z

<p>Protected &quot;<a href="/index.php/Transform_track_to_table_(analysis)" title="Transform track to table (analysis)">Transform track to table (analysis)</a>&quot;: Autogenerated page (‎[edit=sysop] (indefinite))</p> <table class='diff diff-contentalign-left'> <tr style='vertical-align: top;'> <td colspan='1' style="background-color: white; color:black;">← Older revision</td> <td colspan='1' style="background-color: white; color:black;">Revision as of 12:00, 13 February 2017</td> </tr></table>

WikiBot https://wiki.biouml.org/index.php?title=Transform_track_to_table_(analysis)&diff=6969&oldid=prev 2017-02-13T12:00:25Z

<p>Automatic synchronization with BioUML</p> <p><b>New page</b></p><div>;Analysis title<br /> :[[File:Default-analysis-icon.png]] Transform track to table<br /> ;Provider<br /> :[[Institute of Systems Biology]]<br /> ;Class<br /> :{{Class|biouml.plugins.bindingregions.analysis.TransformTrackToTable}}<br /> ;Plugin<br /> :[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]]<br /> <br /> ==== Description ====<br /> Create data matrix with sequence sample and/or values of variables that are dynamic properties of sites in track<br /> <br /> ==== Parameters: ====<br /> <br /> * '''Input track''' – Select input track (it can be ChIP-seq track from GTRD; thus, it can be the result of MACS or SISSRs peak-finder)<br /> * '''Table content''' – Select table content<br /> * '''Variable names''' – Select variable names<br /> * '''Sequences collection''' – Select a source of nucleotide sequences<br /> ** '''Sequences source''' – Select database to get sequences from or &lt;nowiki&gt;'&lt;/nowiki&gt;Custom&lt;nowiki&gt;'&lt;/nowiki&gt; to specify sequences location manually<br /> ** '''Sequence collection''' – Specify path to folder containing sequences if &lt;nowiki&gt;'&lt;/nowiki&gt;Custom&lt;nowiki&gt;'&lt;/nowiki&gt; sequences source is selected<br /> * '''Sequence sample type''' – Select sequence sample type<br /> * '''Specified length of sequence''' – Specify sequence length<br /> * '''Output table path''' – Path to the output table<br /> <br /> [[Category:Analyses]]<br /> [[Category:Binding regions (analyses group)]]<br /> [[Category:ISB analyses]]<br /> [[Category:Autogenerated pages]]</div>

WikiBot