https://wiki.biouml.org/index.php?action=history&feed=atom&title=Sensitivity_Analysis 2026-04-13T04:10:17Z Revision history for this page on the wiki MediaWiki 1.20.3 https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=8784&oldid=prev 2020-12-09T11:14:51Z

<p>Automatic synchronization with BioUML</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 11:14, 9 December 2020</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:[[File:<del class="diffchange diffchange-inline">DAE</del>-<del class="diffchange diffchange-inline">models</del>-Sensitivity-Analysis-icon.png]] Sensitivity Analysis</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:[[File:<ins class="diffchange diffchange-inline">Differential</ins>-<ins class="diffchange diffchange-inline">algebraic-equations</ins>-Sensitivity-Analysis-icon.png]] Sensitivity Analysis</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 11:</td> <td colspan="2" class="diff-lineno">Line 11:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The method calculates sensitivities associated with the steady state of the purely temporal system</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The method calculates sensitivities associated with the steady state of the purely temporal system</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:: [[File:<del class="diffchange diffchange-inline">DAE</del>-<del class="diffchange diffchange-inline">models</del>-Sensitivity-Analysis-sa1.png]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:: [[File:<ins class="diffchange diffchange-inline">Differential</ins>-<ins class="diffchange diffchange-inline">algebraic-equations</ins>-Sensitivity-Analysis-sa1.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 17:</td> <td colspan="2" class="diff-lineno">Line 17:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The local unscaled sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The local unscaled sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:: [[File:<del class="diffchange diffchange-inline">DAE</del>-<del class="diffchange diffchange-inline">models</del>-Sensitivity-Analysis-sa2.png]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:: [[File:<ins class="diffchange diffchange-inline">Differential</ins>-<ins class="diffchange diffchange-inline">algebraic-equations</ins>-Sensitivity-Analysis-sa2.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>The <del class="diffchange diffchange-inline">matrix of </del>scaled sensitivities is calculated by multiplying ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' <del class="diffchange diffchange-inline">and </del>the normalization factor ''α&lt;sub&gt;j&lt;/sub&gt;''/''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'').</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>The scaled sensitivities is calculated by multiplying <ins class="diffchange diffchange-inline">each component </ins>∂''c<ins class="diffchange diffchange-inline">&lt;sup&gt;k&lt;/sup&gt;</ins>''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' <ins class="diffchange diffchange-inline">of the vector ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' by </ins>the normalization factor ''α&lt;sub&gt;j&lt;/sub&gt;''/''c<ins class="diffchange diffchange-inline">&lt;sup&gt;k&lt;/sup&gt;</ins>&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'').</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== References ====</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== References ====</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 28:</td> <td colspan="2" class="diff-lineno">Line 28:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category:Analyses]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category:Analyses]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category:<del class="diffchange diffchange-inline">DAE models </del>(analyses group)]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category:<ins class="diffchange diffchange-inline">Differential algebraic equations </ins>(analyses group)]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category:ISB analyses]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category:ISB analyses]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category:Autogenerated pages]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category:Autogenerated pages]]</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=7728&oldid=prev 2019-03-12T09:32:44Z

<p>Automatic synchronization with BioUML</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 09:32, 12 March 2019</td> </tr><tr><td colspan="2" class="diff-lineno">Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>The local sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>The local <ins class="diffchange diffchange-inline">unscaled </ins>sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:: [[File:DAE-models-Sensitivity-Analysis-sa2.png]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:: [[File:DAE-models-Sensitivity-Analysis-sa2.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">The matrix of scaled sensitivities is calculated by multiplying ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' and the normalization factor ''α&lt;sub&gt;j&lt;/sub&gt;''/''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'').</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== References ====</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== References ====</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=6990&oldid=prev 2017-02-13T12:00:38Z

<p>Automatic synchronization with BioUML</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 12:00, 13 February 2017</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:[[File:<del class="diffchange diffchange-inline">Default</del>-<del class="diffchange diffchange-inline">analysis</del>-icon.png]] Sensitivity Analysis</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:[[File:<ins class="diffchange diffchange-inline">DAE</ins>-<ins class="diffchange diffchange-inline">models-Sensitivity-Analysis</ins>-icon.png]] Sensitivity Analysis</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=4502&oldid=prev 2013-06-14T11:07:34Z

<p>Default analysis icon as separate file</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 11:07, 14 June 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:[[File:<del class="diffchange diffchange-inline">DAE</del>-<del class="diffchange diffchange-inline">models-Sensitivity-Analysis</del>-icon.png]] Sensitivity Analysis</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:[[File:<ins class="diffchange diffchange-inline">Default</ins>-<ins class="diffchange diffchange-inline">analysis</ins>-icon.png]] Sensitivity Analysis</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=3961&oldid=prev 2013-05-31T04:14:25Z

<p>Class name added</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 04:14, 31 May 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">;Class</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">:{{Class|biouml.plugins.modelreduction.SensitivityAnalysis}}</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Plugin</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Plugin</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Biouml.plugins.modelreduction (plugin)|biouml.plugins.modelreduction (Model reduction plug-in)]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Biouml.plugins.modelreduction (plugin)|biouml.plugins.modelreduction (Model reduction plug-in)]]</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=3445&oldid=prev 2013-05-16T05:40:43Z

<p>Mistaken file names update reverted</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 05:40, 16 May 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:[[File:Sensitivity-Analysis-icon.png]] Sensitivity Analysis</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:[[File:<ins class="diffchange diffchange-inline">DAE-models-</ins>Sensitivity-Analysis-icon.png]] Sensitivity Analysis</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=3359&oldid=prev 2013-05-16T05:36:46Z

<p>Automatic synchronization with BioUML</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 05:36, 16 May 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 9:</td> <td colspan="2" class="diff-lineno">Line 9:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The method calculates sensitivities associated with the steady state of the purely temporal system</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The method calculates sensitivities associated with the steady state of the purely temporal system</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:: [[File:Sensitivity-Analysis-sa1.png]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:: [[File:<ins class="diffchange diffchange-inline">DAE-models-</ins>Sensitivity-Analysis-sa1.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The local sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The local sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:: [[File:Sensitivity-Analysis-sa2.png]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:: [[File:<ins class="diffchange diffchange-inline">DAE-models-</ins>Sensitivity-Analysis-sa2.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=3335&oldid=prev 2013-05-16T05:32:45Z

<p>Automatic synchronization with BioUML</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 05:32, 16 May 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Analysis title</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:[[File:<del class="diffchange diffchange-inline">DAE-models-</del>Sensitivity-Analysis-icon.png]] Sensitivity Analysis</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:[[File:Sensitivity-Analysis-icon.png]] Sensitivity Analysis</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 9:</td> <td colspan="2" class="diff-lineno">Line 9:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The method calculates sensitivities associated with the steady state of the purely temporal system</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The method calculates sensitivities associated with the steady state of the purely temporal system</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:: [[File:<del class="diffchange diffchange-inline">DAE-models-</del>Sensitivity-Analysis-sa1.png]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:: [[File:Sensitivity-Analysis-sa1.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c'' is the ''n''-vector of species concentrations, ''α'' is the ''m''-vector of systems parameters (which can include the initial conditions ''c''&lt;sup&gt;0&lt;/sup&gt;), and ''t'' (time) is the variable of integration.</div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The local sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The local sensitivities ∂''c''/∂''α&lt;sub&gt;j&lt;/sub&gt;'' are calculated via finite difference approximations</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:: [[File:<del class="diffchange diffchange-inline">DAE-models-</del>Sensitivity-Analysis-sa2.png]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:: [[File:Sensitivity-Analysis-sa2.png]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>where ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;'') and ''c&lt;sub&gt;ss&lt;/sub&gt;''(''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') correspond to the solutions of the algebraic systems ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 and ''f''(''c'', ''α&lt;sub&gt;j&lt;/sub&gt;''+Δ''α&lt;sub&gt;j&lt;/sub&gt;'') = 0 respectively.</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=2482&oldid=prev 2013-05-07T03:51:06Z

<p>Link to plugin page</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 03:51, 7 May 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 4:</td> <td colspan="2" class="diff-lineno">Line 4:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Plugin</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Plugin</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:biouml.plugins.modelreduction (Model reduction plug-in)</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:<ins class="diffchange diffchange-inline">[[Biouml.plugins.modelreduction (plugin)|</ins>biouml.plugins.modelreduction (Model reduction plug-in)<ins class="diffchange diffchange-inline">]]</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== Description ====</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== Description ====</div></td></tr> </table>

WikiBot https://wiki.biouml.org/index.php?title=Sensitivity_Analysis&diff=2164&oldid=prev 2013-05-06T04:47:04Z

<p>Plugin name added</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 04:47, 6 May 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>;Provider</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:[[Institute of Systems Biology]]</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">;Plugin</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">:biouml.plugins.modelreduction (Model reduction plug-in)</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== Description ====</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>==== Description ====</div></td></tr> </table>

WikiBot