WikiBot: Protected "SNP regions in genome (analysis)": Autogenerated page (‎[edit=sysop] (indefinite))

2013-06-17T06:38:47Z

Protected "SNP regions in genome (analysis)": Autogenerated page (‎[edit=sysop] (indefinite))

WikiBot: Automatic synchronization with BioUML

2013-06-17T06:38:46Z

Automatic synchronization with BioUML

New page

;Analysis title
:[[File:Default-analysis-icon.png]] SNP regions in genome
;Provider
:[[Institute of Systems Biology]]
;Class
:{{Class|biouml.plugins.bindingregions.analysis.SNPRegionsInGenome}}
;Plugin
:[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]]

==== Description ====
This analysis finds SNP regions in genome

==== Parameters: ====

* '''Sequences collection''' – Select a source of nucleotide sequences
** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually
** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
* '''SNP track''' – Track containing SNPs (sites must have <nowiki>'</nowiki>AltAllele<nowiki>'</nowiki> and <nowiki>'</nowiki>RefAllele<nowiki>'</nowiki> properties)
* '''SNP region length''' – Length of each reference region
* '''Output table path''' – Path to the output table

[[Category:Analyses]]
[[Category:Binding regions (analyses group)]]
[[Category:ISB analyses]]
[[Category:Autogenerated pages]]

SNP regions in genome (analysis) - Revision history

WikiBot: Protected "SNP regions in genome (analysis)": Autogenerated page (‎[edit=sysop] (indefinite))

WikiBot: Automatic synchronization with BioUML