Hierarchical layout - Revision history

Lan@dote.ru: +stub message

2013-07-02T06:39:06Z

+stub message

Lan@dote.ru: /* See also */

2013-06-14T10:24:14Z

‎See also

Stan.lo@dote.ru at 10:17, 14 June 2013

2013-06-14T10:17:54Z

Lan@dote.ru at 08:55, 14 June 2013

2013-06-14T08:55:11Z

Lan@dote.ru: hierarchic -> hierarchical

2013-06-14T08:46:33Z

hierarchic -> hierarchical

Lan@dote.ru at 08:24, 14 June 2013

2013-06-14T08:24:27Z

Lan@dote.ru: +Category:Layout algorithms

2013-06-14T04:32:52Z

+Category:Layout algorithms

Stan.lo@dote.ru: Created page with "{{stub}} The hierarchic layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is es..."

2013-06-13T13:27:13Z

Created page with "{{stub}} The hierarchic layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is es..."

New page

{{stub}}

The hierarchic layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout|force-directed layout]] may be more appropiate.

@@ Line 1: / Line 1: @@
 {{Layout algorithm|ru.biosoft.graph.HierarchicLayouter}}
-{{stub}}
+{{stub|algorithm details and references}}
 The hierarchical layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout|force-directed layout]] may be more appropiate.

← Older revision		Revision as of 10:24, 14 June 2013
Line 5:		Line 5:

	==See also==		==See also==
−	* [[~~Diagram_document~~]]	+	* [[Diagram document]]

← Older revision		Revision as of 10:17, 14 June 2013
Line 3:		Line 3:

	The hierarchical layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout\|force-directed layout]] may be more appropiate.		The hierarchical layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout\|force-directed layout]] may be more appropiate.
		+
		+	==See also==
		+	* [[Diagram_document]]

← Older revision		Revision as of 08:55, 14 June 2013
Line 1:		Line 1:
		+	{{Layout algorithm\|ru.biosoft.graph.HierarchicLayouter}}
	{{stub}}		{{stub}}
−
−	~~[[File:Diagram hierarchical view.png\|thumb\|Diagram "Aguda1999_CellCycle" layouted using the hierarchical layout algorithm.]]~~

	The hierarchical layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout\|force-directed layout]] may be more appropiate.		The hierarchical layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout\|force-directed layout]] may be more appropiate.
−
−	~~[[Category:Layout algorithms]]~~

@@ Line 1: / Line 1: @@
 {{stub}}
-[[File:Diagram hierarchical view.png|thumb|Diagram "Aguda1999_CellCycle" layouted using the hierarchic layout algorithm.]]
+[[File:Diagram hierarchical view.png|thumb|Diagram "Aguda1999_CellCycle" layouted using the hierarchical layout algorithm.]]
-The hierarchic layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout|force-directed layout]] may be more appropiate.
+The hierarchical layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout|force-directed layout]] may be more appropiate.
 [[Category:Layout algorithms]]

← Older revision		Revision as of 04:32, 14 June 2013
Line 2:		Line 2:

	The hierarchic layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout\|force-directed layout]] may be more appropiate.		The hierarchic layout algorithm tries to arrange the compounds in a fashion that the irreversible reactions point in one direction. This type of visuallization is especially useful for metabolic pathways, in which the reactions occur only in one direction. The algorithm partitions the compounds into layers and than arranges the compounds in the layers, such that the number of crossings between different reactions is low. The hierarchic layout algorithm usually produces few crossings and no overlaps. However, if the data is not directed, the resulting layout may be not satisfactory and a [[Force directed layout\|force-directed layout]] may be more appropiate.
		+
		+	[[Category:Layout algorithms]]