Motif quality analysis

From BioUML platform
Jump to: navigation, search
Analysis title
BSA-Motif-quality-analysis-icon.png Motif quality analysis
Provider
Institute of Systems Biology
Class
MotifQualityAnalysis
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

Compute ROC curve of motif model

Parameters:

  • Sequences – Track or sequence with motifs
  • Site model – Site model
  • Number of points – Number of points where sensitivity and FDR will be computed
  • Shuffle count – How many times seqeunce letters will be shuffled for FDR estimation
  • Seed – Seed for random number generator
  • Output path – Path to store results
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox