Map Transfac sites to genome (analysis)

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Analysis title
Default-analysis-icon.png Map Transfac sites to genome
Provider
geneXplain GmbH
Class
MapSitesToGenome
Plugin
biouml.plugins.transfac (Support for Transfac database)

Description

Map Transfac sites to genome

Parameters:

  • Transfac – Path to transfac database
  • Ensembl database – Ensembl database
  • Search near genes – If TRANSFAC(R) do not provide absolute genomic coordinates, try to find site sequence near the linked genes
  • Result – Resulting Transfac sites mapped to genome
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