GlycanR (analysis)

From BioUML platform
Revision as of 18:15, 9 December 2020 by BioUML wiki Bot (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Analysis title
Statistics-GlycanR-icon.png GlycanR
Provider
geneXplain GmbH
Class
GlycanrAnalyzer
Plugin
com.genexplain.mimomics (geneXplain MIMOmics)

Conduct an analysis with the glycanr package

This tool provides an interface Ivo Ugrina's glycanr package for glycan analysis.

Parameters

  • Input table - Path to table with input data
  • Group by - Group by values in column
  • Glycanr function - Glycanr function to apply
  • Alpha - (glyco.outliers) Multiplied with the IQR, this parameter determines the strictness of outlier detection
  • Log - (glyco.plot) Log transform values
  • Collapse - (glyco.plot) Collapse plots
  • Output folder - Folder for output files

References

Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox