Find miRNA feed forward loops with CMA (analysis)

From BioUML platform
Revision as of 18:14, 9 December 2020 by BioUML wiki Bot (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Analysis title
Default-analysis-icon.png Find miRNA feed forward loops with CMA
Provider
geneXplain GmbH
Class
FFLoopCMA
Plugin
biouml.plugins.cma (Composite module analyst)

Description

Find miRNA feed forward loops with CMA.

Parameters:

  • miRNA CMA Summary – CMA Summary on miRNA sites
  • Targets CMA Summary – CMA Summary on miRNA target genes
  • miRNA Table – Table with miRBase miRNA symbols
  • miRNA TF Sites – Site search result on miRNA promoters
  • miRNA Promoters – miRNA promoters regions
  • miRNA Scores Table – Table with TargetScan miRNA Scores
  • Result Table – Output: Feed forward loops and scores
  • Run with test data (expert) – Use test data
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox