Create DAS track (analysis)

From BioUML platform
Revision as of 18:07, 14 June 2013 by BioUML wiki Bot (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Analysis title
Default-analysis-icon.png Create DAS track
Provider
Institute of Systems Biology
Class
CreateDASTrackAnalysis
Plugin
biouml.plugins.das (Support for DAS(Distributed Annotation System) protocol)

Description

Create DAS-server track and put into repository

Parameters:

  • DAS server URL – Base URL of DAS server
  • DAS source – Source name
  • DAS type – Type of the track
  • Genome – Attach to genome
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
    • Genome ID string – Something like 'hg18' or 'mm6'
  • Output path – Where to store output
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox